These rich, chocolatey muffins hide a whole cup of zucchini, making them incredibly moist and secretly wholesome. A perfect breakfast or snack that pleases both kids and adults.
What if you could have a deeply chocolatey, bakery-style muffin that’s also packed with a hidden serving of vegetables? These Chocolate Zucchini Muffins make that delicious paradox a reality. The shredded zucchini vanishes into the dark batter, working its magic to create an unbelievably moist and tender crumb while adding nutrients without a trace of “green” flavor.
Topped with a sprinkle of chocolate chips, they taste like pure indulgence but come with a wholesome secret. They’re the ultimate win-win: a satisfying treat for chocolate lovers and a clever way to use up summer’s bounty or sneak veggies into picky eaters.
The Science of the Invisible Veggie & Ultimate Moistness
The success of these muffins hinges on the unique properties of zucchini. When grated, zucchini is about 95% water. During baking, this water slowly releases as steam, which has two crucial effects. First, it keeps the muffin’s interior environment humid, preventing the starches in the flour from drying out and ensuring an exceptionally moist crumb that stays soft for days. Second, the steam helps the muffin rise, creating a light texture.
The cocoa powder and chocolate chips provide such a dominant, rich flavor that they completely mask any vegetal taste. Furthermore, the oil in the recipe coats the flour proteins more thoroughly than butter would, inhibiting gluten formation and guaranteeing tenderness. The zucchini’s moisture is so effective that these muffins require no additional dairy like yogurt or buttermilk, keeping the ingredient list simple and the result decadently fudgy.
Ingredients

For 12 Standard Muffins:
- 1 ½ cups (188g) all-purpose flour
- ⅓ cup (30g) unsweetened cocoa powder
- 1 teaspoon baking soda
- ½ teaspoon baking powder
- ½ teaspoon salt
- ½ teaspoon ground cinnamon (optional, enhances chocolate flavor)
- 2 large eggs, room temperature
- ½ cup (100g) granulated sugar
- ½ cup (110g) packed light brown sugar
- ½ cup (120ml) vegetable oil or melted coconut oil
- 1 teaspoon vanilla extract
- 1 cup (about 120g) finely grated zucchini, unpeeled & NOT drained*
- 1 cup (170g) semi-sweet chocolate chips, divided
*Pack the grated zucchini lightly into the measuring cup. Do not squeeze out the water.
Instructions
1. Prep: Preheat oven to 375°F (190°C). Line a 12-cup muffin tin with paper liners or grease well. Grate the zucchini using the small holes of a box grater.
2. Whisk Dry Ingredients: In a medium bowl, whisk together the flour, cocoa powder, baking soda, baking powder, salt, and cinnamon (if using).
3. Mix Wet Ingredients: In a large bowl, whisk the eggs vigorously for 30 seconds. Add both sugars and whisk until combined and slightly pale. Whisk in the oil and vanilla until smooth.

4. Combine & Fold: Add the dry ingredients to the wet ingredients. Stir with a spatula until just combined and no dry flour remains—do not overmix. Gently fold in the grated zucchini and ¾ cup of the chocolate chips. The batter will be thick.

5. Portion & Top: Divide the batter evenly among the muffin cups, filling each nearly to the top for a nice dome. Sprinkle the remaining ¼ cup of chocolate chips over the tops.
6. Bake: Bake for 18-22 minutes, or until a toothpick inserted into the center of a muffin comes out clean or with a few moist crumbs (but no wet batter).

7. Cool: Let muffins cool in the pan for 5 minutes, then transfer to a wire rack to cool completely. They are very tender when hot.
8. Storage: Store in an airtight container at room temperature for up to 3 days, or freeze for up to 3 months.
Pro-Tips for Muffin Mastery
- Don’t Drain the Zucchini: The moisture is essential. Squeezing it out will result in dry muffins.
- Grate it Fine: Using the small holes on your grater makes the zucchini virtually disappear into the baked muffin, leaving only moistness behind.
- Use Room Temperature Eggs: They incorporate more easily into the batter, creating a better emulsion for even baking.
- The Two-Sugar Trick: Brown sugar adds moisture and a subtle molasses note that pairs perfectly with chocolate, while white sugar helps create a nice crust.
- Fill the Muffin Cups: Don’t be shy. Filling them nearly full (about ¾ full) encourages a beautiful, bakery-style dome.
- The Toothpick Test: Check a minute or two before the minimum time. Overbaking is the enemy of moisture.
- Add-Ins: Stir in ½ cup of chopped walnuts or pecans with the chocolate chips for added crunch. For a double chocolate version, replace ¼ cup of flour with an extra ¼ cup of cocoa powder.
These Chocolate Zucchini Muffins are the delicious proof that sometimes the healthiest ingredients are the ones you never see coming.